SOM cluster: 1003

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 33665
Promoter: 1%
CpG-Island: 0%
Conserved: 18%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 26/100 | e-val: 0.00000000006
Factore-val(match)DB
Lhx30.000009394JASPAR
ARID3A0.000038258JASPAR
Pdx10.000059063JASPAR
Prrx20.000070398JASPAR
HOXA50.0053441JASPAR

BED file downloads

Download top of 33665 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr6: 105662760-105662910RPL35P335.5
chr13: 102847160-102847310FGF14-IT136.3
chr7: 107069980-107070130GPR2238.53
chr16: 87516360-87516510ZCCHC1438.85
chr12: 112475400-112475550NAA2539.56
chrX: 18725445-18725595PPEF139.8
chr8: 101837500-101837650Y_RNA40.63
chr3: 149112600-149112750RP11-278L15.440.92
chr7: 142206560-142206710TRBV12-141.55
chr3: 140776505-140776655SLC25A3642.26
View top connections.

Other

CodePlot