SOM cluster: 1009

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 699
Promoter: 4%
CpG-Island: 0%
Conserved: 35%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 71/100 | e-val: 0
Factore-val(match)DB
HNF1A0JASPAR
HNF1B4.4409e-16JASPAR
Lhx30.00026742JASPAR
NR1H2::RXRA0.00028003JASPAR
ARID3A0.001106JASPAR

BED file downloads

Download top of 699 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr2: 120183480-120183630DBI34.97
chr2: 120183480-120183630TMEM3734.97
chr1: 90302580-90302730LRRC8D37.18
chr1: 54546340-54546490LDLRAD145.44
chr1: 54546340-54546490TMEM5945.44
chr8: 28974320-28974470KIF13B49.17
chr8: 6761660-6761810DEFB149.33
chr8: 6761660-6761810DEFA9P49.33
chr7: 155390520-155390670AC009403.251.38
chr8: 126588540-126588690RP11-136O12.252.17
View top connections.

Other

CodePlot