SOM cluster: 1013

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 799
Promoter: 7%
CpG-Island: 0%
Conserved: 42%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 47/100 | e-val: 3e-21
Factore-val(match)DB
HNF4A0.00000000000097145JASPAR
NR2F10.000000000003302JASPAR
PPARG::RXRA0.000000006805JASPAR
NR1H2::RXRA0.0000041152JASPAR
SOX100.002158JASPAR

BED file downloads

Download top of 799 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr17: 75508080-75508350SEPT941.42
chr17: 48761905-48762055ANKRD4042.62
chr17: 48761905-48762055LINC0048342.62
chr17: 74254760-74254910PRPSAP145.75
chr9: 130153000-130153150SLC2A847.27
chr3: 24563800-24563950THRB48.53
chr3: 24563800-24563950THRB-AS148.53
chr20: 61548300-61548450GID852.44
chr20: 61548300-61548450SLC17A952.44
chr16: 89982165-89982315CENPBD152.78
View top connections.

Other

CodePlot