SOM cluster: 104

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 1004
Promoter: 5%
CpG-Island: 3%
Conserved: 44%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 41/100 | e-val: 8.6e-27
Factore-val(match)DB
Pou5f10JASPAR
Sox20JASPAR
SOX100.00011417JASPAR
SOX90.00028698JASPAR
ARID3A0.0057291JASPAR
Sites: 37/100 | e-val: 0.000000000036
Factore-val(match)DB
SP10.00000000099464JASPAR
EWSR1-FLI10.000000032326JASPAR
Pax40.000011056JASPAR
MZF1_1-40.0013191JASPAR
Tal1::Gata10.0047397JASPAR

BED file downloads

Download top of 1004 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr8: 103449100-103449250RNU6-1224P42.99
chr9: 139043380-139043530LHX344.13
chr6: 38106260-38106410BTBD948.52
chr11: 125280040-125280190FEZ151.59
chr19: 17270840-17270990MYO9B53.22
chr19: 17270840-17270990USE153.22
chr1: 156678220-156678370MRPL2454.68
chr1: 156678220-156678370CRABP254.68
chr1: 53914260-53914410RP11-117D22.157.81
chr1: 24790280-24790430NIPAL358.33
View top connections.

Other

CodePlot