SOM cluster: 1042

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 97
Promoter: 0%
CpG-Island: 2%
Conserved: 58%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 25/97 | e-val: 0.046
Factore-val(match)DB
Foxq10.00000015947JASPAR
FOXI10.0000044297JASPAR
Foxd30.0000078365JASPAR
MEF2A0.000018493JASPAR
Foxa20.000059421JASPAR
Sites: 24/97 | e-val: 0.83
Factore-val(match)DB
Myf0.0000000000019321JASPAR
NHLH10.00000026919JASPAR
Myb0.003267JASPAR
RUNX10.005943JASPAR
REST0.015964JASPAR

BED file downloads

Download top of 97 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr3: 128724580-128724730RP11-434H6.252.74
chr3: 128724580-128724730EFCC152.74
chr3: 128724580-128724730GP952.74
chr3: 128724580-128724730RAB4352.74
chr11: 12136200-12136350MICAL263.2
chr16: 19715860-19716010KNOP165.85
chr16: 19715860-19716010IQCK65.85
chr9: 130283500-130283650SNORA6567.4
chr9: 130283500-130283650STXBP167.4
chr9: 130283500-130283650LRSAM167.4
View top connections.

Other

CodePlot