SOM cluster: 1054

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 1361
Promoter: 27%
CpG-Island: 76%
Conserved: 58%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 81/100 | e-val: 0
Factore-val(match)DB
SP10.00000058961JASPAR
TFAP2A0.000019016JASPAR
PLAG10.0007544JASPAR
Klf40.0040274JASPAR
RXR::RAR_DR50.029596JASPAR
Sites: 70/100 | e-val: 0.0000000000036
Factore-val(match)DB
SP10.0000011538JASPAR
TFAP2A0.00087222JASPAR
Klf40.0045201JASPAR
NHLH10.0095428JASPAR
PLAG10.011154JASPAR

BED file downloads

Download top of 1361 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr3: 37494185-37494335ITGA930.17
chr9: 133320580-133320730snoU1332.99
chr9: 117266520-117266670ATP6V1G135.3
chr10: 94834365-94834515CYP26A141.66
chr2: 25265745-25265895EFR3B43.12
chr4: 57397045-57397195THEGL43.22
chr1: 2106385-2106535RP11-181G12.247.9
chr1: 70033660-70033810LRRC748.93
chrX: 134156680-134156830FAM127B49.56
chr8: 41755225-41755375KAT6A49.9
View top connections.

Other

CodePlot