SOM cluster: 1056

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 1540
Promoter: 34%
CpG-Island: 4%
Conserved: 18%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 22/100 | e-val: 0.45
Factore-val(match)DB
Myf0.00060944JASPAR
Pax50.00084755JASPAR
FEV0.0023653JASPAR
Pax60.0036384JASPAR
Stat30.0071926JASPAR

BED file downloads

Download top of 1540 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr1: 145574705-145574855ITGA1012.93
chr1: 145574705-145574855RP11-315I20.312.93
chr1: 150978605-150978755SETDB114.96
chr1: 150978605-150978755RP11-316M1.1214.96
chr18: 2571960-2572110METTL423.65
chr8: 48174080-48174230RP11-1134I14.436.3
chr2: 64882620-64882770AFTPH37.01
chr17: 38109865-38110015IKZF340.7
chr17: 38109865-38110015LRRC3C40.7
chr17: 38109865-38110015GSDMB40.7
View top connections.

Other

CodePlot