SOM cluster: 106

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 163
Promoter: 4%
CpG-Island: 2%
Conserved: 27%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 29/100 | e-val: 0.00000000073
Factore-val(match)DB
SP10.0000002939JASPAR
Pax40.00001105JASPAR
EWSR1-FLI10.00035723JASPAR
PLAG10.00047476JASPAR
MZF1_1-40.0016266JASPAR
Sites: 17/100 | e-val: 0.31
Factore-val(match)DB
INSM10.000000061004JASPAR
PPARG::RXRA0.0000071023JASPAR
SP10.000076495JASPAR
NR2F10.00022314JASPAR
HNF4A0.00042955JASPAR

BED file downloads

Download top of 163 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr9: 138022160-138022310OLFM133.8
chr7: 142981920-142982070TMEM13938.31
chr9: 138044680-138044830RP11-399H11.339.67
chr12: 112443800-112443950NAA2551.27
chr12: 112443800-112443950TMEM11651.27
chr1: 26421380-26421530RP11-96L14.758.22
chr1: 204049280-204049430SOX1358.23
chr1: 204049280-204049430LINC0030358.23
chr12: 53398060-53398210KRT1859.57
chr12: 53398060-53398210KRT859.57
View top connections.

Other

CodePlot