SOM cluster: 1067

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 53
Promoter: 17%
CpG-Island: 2%
Conserved: 25%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 35/53 | e-val: 8.2e-17
Factore-val(match)DB
Pax40.000000024791JASPAR
SP10.00000011613JASPAR
Klf40.00014267JASPAR
RREB10.0033338JASPAR
RXR::RAR_DR50.0039467JASPAR

BED file downloads

Download top of 53 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr11: 70864260-70864410SHANK257.01
chr2: 220436760-220436910TMEM19871.25
chr2: 220436760-220436910CHPF71.25
chr2: 220436760-220436910INHA71.25
chr2: 220436760-220436910OBSL171.25
chr1: 54482220-54482370LRRC4271.48
chr20: 48804120-48804270CEBPB72.18
chr20: 48804120-48804270RP11-112L6.472.18
chr3: 13526700-13526850HDAC1173.41
chr1: 200865920-200866070C1orf10686.41
View top connections.

Other

CodePlot