SOM cluster: 1068

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 175
Promoter: 24%
CpG-Island: 29%
Conserved: 48%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 76/100 | e-val: 1.90016e-42
Factore-val(match)DB
CTCF0.0000000017885JASPAR
SP10.000000001947JASPAR
INSM10.00021023JASPAR
Klf40.00051463JASPAR
PPARG0.014717JASPAR
Sites: 45/100 | e-val: 0.000000000017
Factore-val(match)DB
SP10.000013015JASPAR
RREB10.00057128JASPAR
Pax40.0018909JASPAR
Klf40.004053JASPAR
Pax50.0078447JASPAR
Sites: 27/100 | e-val: 0.018
Factore-val(match)DB
Myf0.000000048302JASPAR
NHLH10.00000076028JASPAR
Myb0.011676JASPAR
ZEB10.025156JASPAR
TAL1::TCF30.026528JASPAR

BED file downloads

Download top of 175 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr1: 55267220-55267370TTC2234.17
chr1: 55267220-55267370TTC434.17
chr1: 226150185-226150335RP4-559A3.746.86
chr1: 226150185-226150335PYCR246.86
chr1: 226150185-226150335H3F3A46.86
chr1: 226150185-226150335LEFTY146.86
chr10: 98479680-98479830PIK3AP152.46
chr10: 98479680-98479830RP11-34E5.452.46
chr19: 50836640-50836790NAPSB55.55
chr19: 50836640-50836790POLD155.55
View top connections.

Other

CodePlot