SOM cluster: 1071

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 134
Promoter: 33%
CpG-Island: 66%
Conserved: 84%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 37/100 | e-val: 0
Factore-val(match)DB
REST0JASPAR
RXR::RAR_DR50.009588JASPAR
TLX1::NFIC0.010306JASPAR
MIZF0.022254JASPAR
MYC::MAX0.024041JASPAR
Sites: 81/100 | e-val: 1.3e-39
Factore-val(match)DB
SP10.00000038893JASPAR
TFAP2A0.000039415JASPAR
Egr10.0014483JASPAR
Klf40.0019486JASPAR
PLAG10.002354JASPAR
Sites: 58/100 | e-val: 3.5e-22
Factore-val(match)DB
SP10.00033497JASPAR
TFAP2A0.0011857JASPAR
PLAG10.03671JASPAR
E2F10.050984JASPAR
Zfx0.054917JASPAR
Sites: 45/100 | e-val: 0.9
Factore-val(match)DB
SP10.00024239JASPAR
TFAP2A0.00042367JASPAR
PLAG10.0015591JASPAR
Klf40.0070636JASPAR
TP530.01378JASPAR

BED file downloads

Download top of 134 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr5: 170846340-170846490FGF1855.49
chr6: 1524340-1524490RP11-157J24.168.14
chr9: 133972265-133972415AIF1L69.57
chr18: 19749000-19749150GATA671.41
chr22: 30085920-30086070RP1-76B20.1273.63
chr1: 4716440-4716590AJAP174.37
chr7: 157483720-157483870AC005481.575.85
chr1: 2399585-2399735PLCH277.83
chr16: 22824580-22824730HS3ST279.23
chr12: 56651265-56651415STAT279.34
View top connections.

Other

CodePlot