SOM cluster: 1090

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 280
Promoter: 1%
CpG-Island: 0%
Conserved: 59%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 25/100 | e-val: 0.0000052
Factore-val(match)DB
Foxd30.000048334JASPAR
Pax40.00035821JASPAR
NFATC20.0023947JASPAR
MEF2A0.0035762JASPAR
NR3C10.0040166JASPAR

BED file downloads

Download top of 280 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr1: 149399320-149399470RP11-403I13.913.02
chr1: 198092380-198092530NEK743.04
chrX: 12996840-12996990TLR8-AS143.39
chr2: 55327100-55327250RTN447.12
chr2: 55327100-55327250RNU6-433P47.12
chr6: 52461460-52461610TRAM248.66
chr6: 52461460-52461610TRAM2-AS148.66
chr4: 114495820-114495970CAMK2D48.95
chr9: 107641960-107642110ABCA151.88
chr2: 152190860-152191010RIF152.98
View top connections.

Other

CodePlot