SOM cluster: 1114

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 139
Promoter: 6%
CpG-Island: 1%
Conserved: 65%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 46/100 | e-val: 0
Factore-val(match)DB
SOX100.000001237JASPAR
SOX90.00080383JASPAR
Sox170.0072332JASPAR
Sox20.0088829JASPAR
HNF4A0.015255JASPAR
Sites: 26/100 | e-val: 0.00000000039
Factore-val(match)DB
SP10.000000026212JASPAR
Pax40.00000069803JASPAR
Klf40.000021335JASPAR
EWSR1-FLI10.000060905JASPAR
RREB10.00010162JASPAR

BED file downloads

Download top of 139 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr3: 37950980-37951130AC093415.243.52
chr3: 37950980-37951130CTDSPL43.52
chr6: 3247660-3247810TUBB2A58.61
chr19: 51858120-51858270ETFB62.25
chr19: 51858120-51858270CLDND262.25
chr19: 51858120-51858270VSIG10L62.25
chr1: 223953060-223953210CAPN864.87
chr20: 32922705-32922855ITCH65.56
chr17: 28671340-28671490CPD65.99
chr5: 148442580-148442730SH3TC266.39
View top connections.

Other

CodePlot