SOM cluster: 1135

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 1641
Promoter: 0%
CpG-Island: 0%
Conserved: 42%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 25/100 | e-val: 0.00082
Factore-val(match)DB
RUNX10.0000093735JASPAR
ZNF354C0.0029098JASPAR
RREB10.0073642JASPAR
Tcfcp2l10.035525JASPAR
MYC::MAX0.042637JASPAR

BED file downloads

Download top of 1641 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr21: 27211280-27211430GABPA51.64
chr4: 166364560-166364710CPE56.52
chr13: 108114220-108114370FAM155A57.13
chr7: 37963985-37964135SFRP459.17
chr5: 170842420-170842570FGF1859.48
chr7: 130780240-130780390RNU6-1010P60.59
chr10: 17386360-17386510ST8SIA661.07
chr12: 63077865-63078015MIRLET7I61.41
chr12: 63077865-63078015MON261.41
chr22: 42625620-42625770TCF2063.3
View top connections.

Other

CodePlot