SOM cluster: 1138

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 261
Promoter: 1%
CpG-Island: 0%
Conserved: 28%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 62/100 | e-val: 4.6e-19
Factore-val(match)DB
HNF1B0.00024792JASPAR
HNF1A0.00030393JASPAR
Foxq10.000341JASPAR
ARID3A0.00075552JASPAR
SRY0.0042698JASPAR
Sites: 14/100 | e-val: 0.27
Factore-val(match)DB
MEF2A0.0000038974JASPAR
Lhx30.000049813JASPAR
NKX3-10.00062639JASPAR
HNF1A0.00076085JASPAR
Foxq10.00085657JASPAR

BED file downloads

Download top of 261 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr3: 30269160-30269310U337.19
chr3: 32010060-32010210OSBPL1043.3
chr3: 171859860-171860010FNDC3B45.37
chr11: 33033460-33033610DEPDC750.73
chr2: 65180005-65180155RNU6-548P54.16
chr4: 169717800-169717950PALLD64.61
chr4: 169717800-169717950RPL9P1664.61
chr3: 161133640-161133790PSMC1P767.27
chr11: 124171520-124171670OR8B5P68.41
chr11: 124171520-124171670OR8G568.41
View top connections.

Other

CodePlot