SOM cluster: 1142

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 178
Promoter: 23%
CpG-Island: 19%
Conserved: 69%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 54/100 | e-val: 3e-37
Factore-val(match)DB
SP10.00000009408JASPAR
Pax40.00039075JASPAR
EWSR1-FLI10.0012143JASPAR
PLAG10.0029791JASPAR
Klf40.0041095JASPAR
Sites: 72/100 | e-val: 7.8e-18
Factore-val(match)DB
TLX1::NFIC0.000023984JASPAR
SP10.00014156JASPAR
Klf40.0020307JASPAR
E2F10.0075123JASPAR
REST0.0091549JASPAR
Sites: 35/100 | e-val: 0.00000085
Factore-val(match)DB
SP10.0000000026331JASPAR
Pax40.00023602JASPAR
Tal1::Gata10.001252JASPAR
MZF1_1-40.0021945JASPAR
Klf40.0040221JASPAR
Sites: 11/100 | e-val: 0.75
Factore-val(match)DB
SP10.0026871JASPAR
Tal1::Gata10.0092272JASPAR
REL0.037163JASPAR
TEAD10.040103JASPAR
AP10.040214JASPAR

BED file downloads

Download top of 178 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr4: 8216920-8217070HTRA315.65
chr19: 10120040-10120190PPAN-P2RY1141.46
chr19: 10120040-10120190COL5A341.46
chr19: 10120040-10120190PPAN41.46
chr19: 10120040-10120190ANGPTL641.46
chr17: 75473780-75473930SEPT949.36
chr3: 129280160-129280310PLXND149.8
chr9: 116919060-116919210COL27A149.94
chr9: 133321620-133321770snoU1353.71
chr14: 24838160-24838310LTB4R254.8
View top connections.

Other

CodePlot