SOM cluster: 1146

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 126
Promoter: 6%
CpG-Island: 1%
Conserved: 38%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 36/100 | e-val: 0.00000000026
Factore-val(match)DB
NFE2L21.1102e-16JASPAR
AP10.000000014509JASPAR
NFE2L1::MafG0.0046483JASPAR
Pax20.0073903JASPAR
Mafb0.023516JASPAR
Sites: 23/100 | e-val: 0.0012
Factore-val(match)DB
Pax40.0000057435JASPAR
Klf40.000017621JASPAR
RREB10.000068897JASPAR
SP10.0033676JASPAR
MZF1_1-40.003715JASPAR
Sites: 15/100 | e-val: 0.029
Factore-val(match)DB
EWSR1-FLI10.00021771JASPAR
TLX1::NFIC0.0035267JASPAR
SPIB0.0063284JASPAR
RXR::RAR_DR50.0090388JASPAR
Sox20.010384JASPAR

BED file downloads

Download top of 126 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr17: 76386365-76386515RN7SL236P52.69
chr17: 76386365-76386515DNAH1752.69
chr17: 76386365-76386515SNORA3052.69
chr2: 74230740-74230890RP11-711M9.154.95
chr2: 74230740-74230890ACTG254.95
chr2: 74230740-74230890AC073046.2554.95
chr8: 99179200-99179350NIPAL256.12
chr8: 99179200-99179350C8orf4756.12
chr21: 46716000-46716150POFUT261.62
chr21: 46716000-46716150BX322557.1061.62
View top connections.

Other

CodePlot