SOM cluster: 1156

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 1285
Promoter: 26%
CpG-Island: 84%
Conserved: 67%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 89/100 | e-val: 0
Factore-val(match)DB
SP10.0000027187JASPAR
TFAP2A0.000017549JASPAR
PLAG10.00053788JASPAR
Egr10.0080449JASPAR
INSM10.037191JASPAR
Sites: 66/100 | e-val: 0
Factore-val(match)DB
TFAP2A0.0000068109JASPAR
SP10.002195JASPAR
PLAG10.015755JASPAR
Klf40.019332JASPAR
TP530.020041JASPAR
Sites: 56/100 | e-val: 0.0000001
Factore-val(match)DB
SP10.00000023789JASPAR
TFAP2A0.000026844JASPAR
PLAG10.000053362JASPAR
Klf40.02641JASPAR
GABPA0.067561JASPAR

BED file downloads

Download top of 1285 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr10: 82168640-82168790FAM213A33.22
chr7: 139167885-139168035RP4-701O16.540.94
chr12: 121078465-121078615CABP145.98
chr12: 121078465-121078615POP545.98
chr12: 121078465-121078615RP11-173P15.345.98
chr19: 40972945-40973095BLVRB47.17
chr19: 40972945-40973095HIPK447.17
chr19: 35454765-35454915SCN1B48.84
chr19: 35454765-35454915ZNF79248.84
chr2: 25538185-25538335DNMT3A49.13
View top connections.

Other

CodePlot