SOM cluster: 1157

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 418
Promoter: 20%
CpG-Island: 90%
Conserved: 65%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 99/100 | e-val: 0
Factore-val(match)DB
SP10.000071181JASPAR
TFAP2A0.000074449JASPAR
PLAG10.034125JASPAR
Egr10.048084JASPAR
Myc0.10459JASPAR
Sites: 94/100 | e-val: 0.000000000000032
Factore-val(match)DB
SP10.000015783JASPAR
TFAP2A0.0011382JASPAR
Klf40.0032571JASPAR
PLAG10.0090119JASPAR
CTCF0.024799JASPAR

BED file downloads

Download top of 418 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr11: 14926740-14926890CALCA44.51
chr11: 118479640-118479790RNU6-1157P51.13
chr17: 74118120-74118270EVPL53.67
chr17: 74118120-74118270GALR253.67
chr7: 128470625-128470775KCP54.43
chr4: 81123805-81123955RP11-162K6.156.95
chr17: 38347505-38347655RAPGEFL156.98
chr17: 76355380-76355530RN7SL236P57.32
chr16: 67048320-67048470CBFB58.6
chr16: 67048320-67048470FAM96B58.6
View top connections.

Other

CodePlot