SOM cluster: 1158

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 221
Promoter: 1%
CpG-Island: 2%
Conserved: 43%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 53/100 | e-val: 1.6e-38
Factore-val(match)DB
REST0.0027046JASPAR
TLX1::NFIC0.0055193JASPAR
TFAP2A0.019374JASPAR
SP10.026843JASPAR
Tcfcp2l10.03523JASPAR
Sites: 64/100 | e-val: 0.0000000001
Factore-val(match)DB
Myf0.000035148JASPAR
NHLH10.00053911JASPAR
Myb0.0072491JASPAR
TLX1::NFIC0.019896JASPAR
SPI10.024695JASPAR
Sites: 22/100 | e-val: 0.000034
Factore-val(match)DB
TLX1::NFIC0.000054282JASPAR
AP10.0036604JASPAR
Tcfcp2l10.006695JASPAR
NFE2L20.0128JASPAR
NFIC0.024615JASPAR
Sites: 17/100 | e-val: 1.5
Factore-val(match)DB
REST0.00023395JASPAR
INSM10.0053828JASPAR
ESR10.0084703JASPAR
Myf0.010018JASPAR
Zfp4230.017758JASPAR

BED file downloads

Download top of 221 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr16: 85640560-85640710GSE150.55
chr3: 140812840-140812990RP11-231L11.160.05
chr7: 139376340-139376490HIPK262.32
chr22: 46502965-46503115PPARA64.04
chr22: 46502965-46503115RP6-109B7.364.04
chr1: 110175380-110175530AMPD270.35
chr1: 110175380-110175530GSTM170.35
chr3: 8692640-8692790LMCD1-AS170.52
chr5: 156876565-156876715NIPAL478.72
chr5: 156876565-156876715ADAM1978.72
View top connections.

Other

CodePlot