SOM cluster: 1159

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 416
Promoter: 36%
CpG-Island: 97%
Conserved: 65%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 88/100 | e-val: 0
Factore-val(match)DB
TFAP2A0.000052921JASPAR
SP10.009601JASPAR
PLAG10.02463JASPAR
NHLH10.029595JASPAR
Zfx0.041336JASPAR
Sites: 73/100 | e-val: 3.9e-28
Factore-val(match)DB
SP10.000059253JASPAR
INSM10.0070242JASPAR
TFAP2A0.011596JASPAR
CTCF0.053132JASPAR
E2F10.10729JASPAR

BED file downloads

Download top of 416 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr1: 894360-894510RP11-54O7.1441.21
chr1: 894360-894510AGRN41.21
chr1: 894360-894510RP11-54O7.341.21
chr22: 50742620-50742770PPP6R248.35
chr9: 139377120-139377270RP11-413M3.448.56
chr16: 1524565-1524715IFT14052.05
chr19: 10654820-10654970KRI153.26
chr19: 8510500-8510650MYO1F54.11
chr19: 8510500-8510650ANGPTL454.11
chr15: 91414305-91414455HDDC354.19
View top connections.

Other

CodePlot