SOM cluster: 1168

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 281
Promoter: 23%
CpG-Island: 50%
Conserved: 42%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 56/100 | e-val: 2.9e-23
Factore-val(match)DB
SP10.0000012307JASPAR
Klf40.00087822JASPAR
TFAP2A0.021991JASPAR
Egr10.033876JASPAR
PLAG10.050747JASPAR
Sites: 35/100 | e-val: 0.00000092
Factore-val(match)DB
NHLH10.001097JASPAR
Myf0.0026911JASPAR
TFAP2A0.013462JASPAR
CTCF0.014453JASPAR
PLAG10.018804JASPAR
Sites: 28/100 | e-val: 0.000024
Factore-val(match)DB
SP10.00000031334JASPAR
INSM10.000022138JASPAR
PLAG10.00039609JASPAR
Pax40.0010278JASPAR
RREB10.0011647JASPAR

BED file downloads

Download top of 281 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr9: 139222145-139222295SDCCAG357.92
chr7: 138719885-138720035ZC3HAV1L58.15
chr7: 138719885-138720035RP11-383F6.158.15
chr1: 246981185-246981335SCCPDH58.35
chr17: 3627745-3627895GSG260.55
chr17: 3627745-3627895EMC660.55
chr8: 12294165-12294315FAM66A63.19
chr17: 17721440-17721590SREBF164.62
chr17: 17721440-17721590SMCR564.62
chr20: 1857605-1857755RP4-673D20.365.02
View top connections.

Other

CodePlot