SOM cluster: 1175

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 278
Promoter: 32%
CpG-Island: 90%
Conserved: 60%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 99/100 | e-val: 0
Factore-val(match)DB
SP10.00000021873JASPAR
TFAP2A0.00023301JASPAR
Egr10.0027326JASPAR
Klf40.0030992JASPAR
PLAG10.0033567JASPAR
Sites: 71/100 | e-val: 5.5e-19
Factore-val(match)DB
SP10.00003216JASPAR
TFAP2A0.037272JASPAR
Pax40.043706JASPAR
MZF1_1-40.044481JASPAR
INSM10.045688JASPAR

BED file downloads

Download top of 278 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr3: 145968560-145968710PLSCR448.65
chr3: 49170740-49170890KLHDC8B55.88
chr3: 153839325-153839475RPL21P4257.04
chr9: 115873485-115873635FAM225A57.86
chr12: 679525-679675RP5-1154L15.160.79
chr12: 679525-679675RP5-1154L15.260.79
chr8: 124173005-124173155HMGB1P1961.7
chr1: 44871025-44871175RNF22063.14
chr17: 46633045-46633195HOXB264.04
chr17: 46633045-46633195HOXB464.04
View top connections.

Other

CodePlot