SOM cluster: 1185

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 436
Promoter: 1%
CpG-Island: 0%
Conserved: 29%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 26/100 | e-val: 0.00088
Factore-val(match)DB
Pax40.00025594JASPAR
Sox20.008749JASPAR
Pou5f10.011771JASPAR
NF-kappaB0.013755JASPAR
REL0.015227JASPAR
Sites: 32/100 | e-val: 1.4
Factore-val(match)DB
TEAD10.000079753JASPAR
SOX90.00079876JASPAR
NKX3-10.0030249JASPAR
Sox50.0035112JASPAR
znf1430.0055528JASPAR
Sites: 12/100 | e-val: 0.038
Factore-val(match)DB
Sox20.0010601JASPAR
Pou5f10.001443JASPAR
Foxd30.0030706JASPAR
NFATC20.0058374JASPAR
FOXI10.013445JASPAR

BED file downloads

Download top of 436 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr7: 38422205-38422355AMPH46.88
chr19: 34809540-34809690RPL29P3352.58
chr19: 34809540-34809690LSM14A52.58
chr19: 34809540-34809690GPI52.58
chr19: 34809540-34809690PDCD2L52.58
chr6: 44202280-44202430SLC35B254.54
chr11: 69974165-69974315RP11-805J14.359.49
chr11: 15649220-15649370RP11-531H8.260.24
chr5: 115022480-115022630TMED7-TICAM260.73
chr5: 115022480-115022630TMED760.73
View top connections.

Other

CodePlot