SOM cluster: 1185
Cluster Hypersensitivity Profile
Genomic Location Trend
These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.Stats
Number of sites: 436Promoter: 1%
CpG-Island: 0%
Conserved: 29%
Enriched Motifs & Matches
Match Detail: [Jaspar]Sites: 26/100 | e-val: 0.00088 | ||
---|---|---|
Factor | e-val(match) | DB |
Pax4 | 0.00025594 | JASPAR |
Sox2 | 0.008749 | JASPAR |
Pou5f1 | 0.011771 | JASPAR |
NF-kappaB | 0.013755 | JASPAR |
REL | 0.015227 | JASPAR |
Sites: 32/100 | e-val: 1.4 | ||
Factor | e-val(match) | DB |
TEAD1 | 0.000079753 | JASPAR |
SOX9 | 0.00079876 | JASPAR |
NKX3-1 | 0.0030249 | JASPAR |
Sox5 | 0.0035112 | JASPAR |
znf143 | 0.0055528 | JASPAR |
Sites: 12/100 | e-val: 0.038 | ||
Factor | e-val(match) | DB |
Sox2 | 0.0010601 | JASPAR |
Pou5f1 | 0.001443 | JASPAR |
Foxd3 | 0.0030706 | JASPAR |
NFATC2 | 0.0058374 | JASPAR |
FOXI1 | 0.013445 | JASPAR |
BED file downloads
Top 10 Example Regions
Location | Gene Link | Dist. |
---|---|---|
chr7: 38422205-38422355 | AMPH | 46.88 |
chr19: 34809540-34809690 | LSM14A | 52.58 |
chr19: 34809540-34809690 | GPI | 52.58 |
chr19: 34809540-34809690 | PDCD2L | 52.58 |
chr19: 34809540-34809690 | RPL29P33 | 52.58 |
chr6: 44202280-44202430 | SLC35B2 | 54.54 |
chr11: 69974165-69974315 | RP11-805J14.3 | 59.49 |
chr11: 15649220-15649370 | RP11-531H8.2 | 60.24 |
chr5: 115022480-115022630 | TMED7 | 60.73 |
chr5: 115022480-115022630 | CTC-505O3.1 | 60.73 |