SOM cluster: 1189

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 231
Promoter: 5%
CpG-Island: 0%
Conserved: 40%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 56/100 | e-val: 6.3e-19
Factore-val(match)DB
MEF2A0.000033113JASPAR
Foxa20.0023334JASPAR
FOXA10.0092267JASPAR
Foxq10.009286JASPAR
FOXI10.0095213JASPAR

BED file downloads

Download top of 231 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr3: 149290880-149291030WWTR139.71
chr5: 172209340-172209490RP11-779O18.243.32
chr5: 172209340-172209490DUSP143.32
chr12: 15815480-15815630EPS845.36
chr12: 15815480-15815630PTPRO45.36
chr12: 27772220-27772370RP11-709A23.248
chr12: 27772220-27772370RP11-1060J15.448
chr12: 27772220-27772370PPFIBP148
chr2: 62806620-62806770EHBP154.54
chr10: 32229680-32229830KIF5B56.78
View top connections.

Other

CodePlot