SOM cluster: 1205

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 380
Promoter: 23%
CpG-Island: 93%
Conserved: 71%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 100/100 | e-val: 0
Factore-val(match)DB
TFAP2A0.0008748JASPAR
Zfx0.0057924JASPAR
SP10.020577JASPAR
PLAG10.021165JASPAR
MIZF0.053128JASPAR
Sites: 94/100 | e-val: 6.09565e-43
Factore-val(match)DB
PLAG10.000014675JASPAR
TFAP2A0.000042939JASPAR
SP10.00061196JASPAR
Klf40.0022597JASPAR
Zfx0.01808JASPAR
Sites: 56/100 | e-val: 0.000048
Factore-val(match)DB
SP10.000031038JASPAR
TFAP2A0.000084836JASPAR
RREB10.0045723JASPAR
Klf40.0049469JASPAR
Egr10.017917JASPAR

BED file downloads

Download top of 380 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr9: 132427485-132427635PRRX235.55
chr1: 1052120-1052270MIR200A41.92
chr1: 1052120-1052270TNFRSF1841.92
chr1: 1052120-1052270AGRN41.92
chr3: 48632620-48632770IP6K243.74
chr3: 48632620-48632770SLC26A643.74
chr3: 48632620-48632770UQCRC143.74
chr8: 143485440-143485590TSNARE146.68
chr17: 7452480-7452630AC113189.555.56
chr7: 45128660-45128810NACAD55.77
View top connections.

Other

CodePlot