SOM cluster: 1222

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 178
Promoter: 38%
CpG-Island: 88%
Conserved: 66%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 95/100 | e-val: 0
Factore-val(match)DB
SP10.000000015678JASPAR
Klf40.000021668JASPAR
Egr10.00047431JASPAR
TFAP2A0.0014555JASPAR
PLAG10.0019074JASPAR
Sites: 92/100 | e-val: 7.9e-40
Factore-val(match)DB
NHLH10.000027605JASPAR
Myf0.0003131JASPAR
TFAP2A0.00035843JASPAR
TP530.029793JASPAR
MYC::MAX0.055224JASPAR

BED file downloads

Download top of 178 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr12: 48298640-48298790TMEM106C49.92
chr8: 104311325-104311475BAALC51.21
chr8: 104311325-104311475CTHRC151.21
chr19: 10679200-10679350KEAP155.82
chr19: 10679200-10679350KRI155.82
chr19: 10679200-10679350ILF355.82
chr19: 10679200-10679350ATG4D55.82
chr1: 1004125-1004275MIR200A56.36
chr17: 26578520-26578670IFT2058.45
chr1: 1141925-1142075RP11-465B22.560.04
View top connections.

Other

CodePlot