SOM cluster: 1225

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 1768
Promoter: 9%
CpG-Island: 21%
Conserved: 49%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 98/100 | e-val: 0
Factore-val(match)DB
SP10.0000000075716JASPAR
Myb0.0028891JASPAR
Klf40.0046934JASPAR
Myc0.0054741JASPAR
TFAP2A0.0078807JASPAR
Sites: 98/100 | e-val: 2.50006e-41
Factore-val(match)DB
INSM10.00042522JASPAR
CTCF0.00055375JASPAR
EBF10.00068261JASPAR
PLAG10.00069164JASPAR
SP10.0021657JASPAR
Sites: 62/100 | e-val: 3.3e-19
Factore-val(match)DB
Tal1::Gata10.00026038JASPAR
TFAP2A0.00041323JASPAR
SP10.0010731JASPAR
PLAG10.001465JASPAR
INSM10.0082634JASPAR
Sites: 43/100 | e-val: 0.055
Factore-val(match)DB
Myf0.000031433JASPAR
NHLH10.0058638JASPAR
REST0.014384JASPAR
TLX1::NFIC0.044837JASPAR
Spz10.060217JASPAR

BED file downloads

Download top of 1768 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr7: 150768165-150768455AGAP337.87
chr7: 150768165-150768455GBX137.87
chr6: 33160665-33160815HLA-DPB244.29
chr6: 33160665-33160815RING144.29
chr6: 33160665-33160815COL11A244.29
chr1: 113392585-113392735RP3-522D1.146.04
chr17: 72920045-72920195TMEM10450.37
chr12: 49690145-49690295RP11-161H23.951.68
chr22: 19884660-19884810GNB1L53.2
chr19: 756905-757195PRTN357.29
View top connections.

Other

CodePlot