SOM cluster: 1233

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 423
Promoter: 0%
CpG-Island: 0%
Conserved: 34%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 45/100 | e-val: 0.000000000014
Factore-val(match)DB
MEF2A0.000217JASPAR
HNF1B0.0032796JASPAR
NFIL30.0092655JASPAR
HNF1A0.011196JASPAR
IRF10.020235JASPAR

BED file downloads

Download top of 423 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr10: 24969740-24969890RNA5SP30526.78
chr4: 87881800-87881950AFF145.17
chr4: 87881800-87881950RP11-397E7.145.17
chr4: 128858260-128858410PLK458.23
chr4: 128858260-128858410C4orf2958.23
chr11: 91985240-91985390NDUFB11P159.01
chr4: 157700260-157700410PDGFC60.68
chr12: 26304140-26304290SSPN60.82
chr11: 76970860-76971010MYO7A62.71
chr13: 50607960-50608110DLEU263.21
View top connections.

Other

CodePlot