SOM cluster: 124

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 244
Promoter: 13%
CpG-Island: 0%
Conserved: 56%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 66/100 | e-val: 0
Factore-val(match)DB
SPI10.0000000021251JASPAR
SPIB0.00000010269JASPAR
FEV0.000002389JASPAR
ELF50.000013596JASPAR
ELK40.000038887JASPAR
Sites: 27/100 | e-val: 0.00000064
Factore-val(match)DB
RREB10.00000000039065JASPAR
Pax40.00000000039177JASPAR
SP10.00000023485JASPAR
EWSR1-FLI10.0054919JASPAR
Tal1::Gata10.0083059JASPAR

BED file downloads

Download top of 244 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr10: 26726960-26727110APBB1IP43.43
chr7: 107776180-107776330NRCAM47.71
chr8: 125208260-125208410FER1L648.27
chr12: 102065240-102065390RNU6-101P51.76
chr7: 150061140-150061290ZNF77551.78
chr7: 150061140-150061290REPIN151.78
chr7: 150061140-150061290LRRC6151.78
chr7: 150061140-150061290LINC0099651.78
chr7: 150061140-150061290GIMAP851.78
chr7: 36824620-36824770ELMO153.08
View top connections.

Other

CodePlot