SOM cluster: 1240

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 133
Promoter: 2%
CpG-Island: 0%
Conserved: 50%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 56/100 | e-val: 1.3e-37
Factore-val(match)DB
AP10.000000066488JASPAR
NFE2L20.000037427JASPAR
NFE2L1::MafG0.0013241JASPAR
IRF10.017124JASPAR
NFATC20.018334JASPAR
Sites: 28/100 | e-val: 0.061
Factore-val(match)DB
Lhx30.0000010071JASPAR
Foxq10.0000066149JASPAR
HNF1A0.0001613JASPAR
Foxd30.00038598JASPAR
MEF2A0.00097318JASPAR

BED file downloads

Download top of 133 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr12: 109116900-109117050SSH148.87
chr12: 109116900-109117050CORO1C48.87
chr12: 109116900-109117050RP11-689B22.248.87
chr7: 16169160-16169310RPL36AP2953.41
chr7: 16169160-16169310ISPD-AS153.41
chr1: 218654080-218654230TGFB254.08
chr2: 160838900-160839050PLA2R157.33
chr11: 104917760-104917910CARD1758.96
chr11: 104917760-104917910CASP558.96
chr11: 104917760-104917910CARD1658.96
View top connections.

Other

CodePlot