SOM cluster: 125

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 191
Promoter: 13%
CpG-Island: 1%
Conserved: 45%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 71/100 | e-val: 0
Factore-val(match)DB
SPI10.000000018684JASPAR
SPIB0.00000038216JASPAR
FEV0.000055456JASPAR
GABPA0.00023699JASPAR
ELK40.00033507JASPAR
Sites: 32/100 | e-val: 0.036
Factore-val(match)DB
Klf40.00000086937JASPAR
SP10.00012347JASPAR
RREB10.0010412JASPAR
INSM10.0059577JASPAR
TFAP2A0.0073912JASPAR
Sites: 23/100 | e-val: 0.0068
Factore-val(match)DB
PLAG10.000032987JASPAR
TFAP2A0.00027525JASPAR
EBF10.00033803JASPAR
Zfp4230.0084623JASPAR
REST0.019014JASPAR

BED file downloads

Download top of 191 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr10: 14690200-14690350FAM107B41.24
chr17: 56017220-56017370SRSF149.52
chr17: 56017220-56017370CUEDC149.52
chr22: 35806140-35806290MCM551.37
chr1: 11025120-11025270C1orf12755.84
chr5: 1494980-1495130SLC6A359.9
chr19: 3180420-3180570S1PR460.47
chr19: 3180420-3180570CELF560.47
chr19: 3180420-3180570GNA1560.47
chr19: 3180420-3180570GNA1160.47
View top connections.

Other

CodePlot