SOM cluster: 1250

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 145
Promoter: 3%
CpG-Island: 2%
Conserved: 57%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 37/100 | e-val: 1e-19
Factore-val(match)DB
Prrx20.000061952JASPAR
Pdx10.000083028JASPAR
TAL1::TCF30.00075086JASPAR
Lhx30.00094082JASPAR
Nobox0.0015925JASPAR
Sites: 26/100 | e-val: 0.033
Factore-val(match)DB
AP10.000000003616JASPAR
NFE2L20.00000057626JASPAR
PBX10.0042348JASPAR
Pdx10.0095307JASPAR
Pou5f10.010278JASPAR

BED file downloads

Download top of 145 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr8: 99191785-99191935POP143.86
chr8: 99191785-99191935NIPAL243.86
chr8: 99191785-99191935C8orf4743.86
chr1: 1295220-1295370ATAD3C47.14
chr1: 1295220-1295370MXRA847.14
chr1: 1295220-1295370MRPL2047.14
chr1: 1295220-1295370TAS1R347.14
chr1: 1295220-1295370UBE2J247.14
chr1: 1295220-1295370AURKAIP147.14
chr1: 1295220-1295370SCNN1D47.14
View top connections.

Other

CodePlot