SOM cluster: 1252

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 244
Promoter: 2%
CpG-Island: 0%
Conserved: 70%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 28/100 | e-val: 1.8
Factore-val(match)DB
Pdx10.0072245JASPAR
IRF20.0095869JASPAR
Foxd30.011053JASPAR
SOX100.019024JASPAR
HOXA50.021135JASPAR

BED file downloads

Download top of 244 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr13: 102848220-102848370RPL39P2930.47
chr13: 102848220-102848370FGF14-IT130.47
chr7: 133668880-133669030EXOC443.57
chr2: 47313840-47313990CALM258.95
chr2: 46009945-46010095PRKCE59.36
chr3: 157884120-157884270RSRC160.29
chr3: 157884120-157884270SHOX260.29
chr8: 20040680-20040830SLC18A164.57
chr8: 20040680-20040830ATP6V1B264.57
chr8: 20040680-20040830LZTS1-AS164.57
View top connections.

Other

CodePlot