SOM cluster: 1257

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 948
Promoter: 10%
CpG-Island: 21%
Conserved: 53%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 94/100 | e-val: 0
Factore-val(match)DB
TFAP2A0.00000049744JASPAR
SP10.000001073JASPAR
INSM10.0010822JASPAR
Klf40.0085385JASPAR
RREB10.040609JASPAR
Sites: 96/100 | e-val: 2.5e-22
Factore-val(match)DB
SP10.0000025011JASPAR
PLAG10.0000151JASPAR
PPARG::RXRA0.000097922JASPAR
RREB10.00039481JASPAR
INSM10.00095606JASPAR
Sites: 45/100 | e-val: 0.0000002
Factore-val(match)DB
PLAG10.0000027883JASPAR
TFAP2A0.0000058915JASPAR
EBF10.00020647JASPAR
Zfx0.0017336JASPAR
HNF4A0.0040072JASPAR
Sites: 34/100 | e-val: 0.19
Factore-val(match)DB
SP10.00055407JASPAR
Myf0.0016274JASPAR
FEV0.0037289JASPAR
Stat30.0040748JASPAR
SPI10.00567JASPAR

BED file downloads

Download top of 948 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr8: 144653060-144653210RP11-661A12.1233.53
chr22: 39885725-39885875RP5-1104E15.637.62
chr7: 45003805-45003955MYO1G39.24
chr5: 175958625-175958775RNF4446.57
chr19: 10224420-10224570C19orf6647.02
chr19: 10224420-10224570C3P147.02
chr4: 1723565-1723715AC016773.147.88
chr4: 1723565-1723715TMEM12947.88
chr19: 2248925-2249075SF3A248.54
chr16: 88874200-88874350CDT148.63
View top connections.

Other

CodePlot