SOM cluster: 1266

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 260
Promoter: 38%
CpG-Island: 75%
Conserved: 79%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 94/100 | e-val: 0
Factore-val(match)DB
SP10.000000091728JASPAR
TFAP2A0.00036972JASPAR
PLAG10.00063173JASPAR
INSM10.0065226JASPAR
RREB10.0077173JASPAR
Sites: 83/100 | e-val: 1.2e-40
Factore-val(match)DB
SP10.0000078414JASPAR
TFAP2A0.00044508JASPAR
Egr10.013806JASPAR
Klf40.017206JASPAR
PLAG10.035074JASPAR
Sites: 55/100 | e-val: 0.0000000000033
Factore-val(match)DB
SP10.00000062131JASPAR
Pax40.0007985JASPAR
RREB10.0059289JASPAR
MZF1_1-40.0062502JASPAR
PPARG::RXRA0.01816JASPAR
Sites: 37/100 | e-val: 0.49
Factore-val(match)DB
TFAP2A0.00009421JASPAR
SP10.00019176JASPAR
Zfx0.012815JASPAR
Klf40.027232JASPAR
REST0.031932JASPAR

BED file downloads

Download top of 260 regions.

Top 10 Example Regions

LocationGene LinkDist.
chrX: 54385360-54385510WNK345.35
chr8: 9791425-9791575LINC0059952.06
chr4: 174438160-174438310HAND253.77
chr7: 98991185-98991335ARPC1A56.22
chr7: 98991185-98991335ARPC1B56.22
chr2: 131556520-131556670AMER356.39
chr1: 154540105-154540255IL6R63.2
chr1: 154540105-154540255CHRNB263.2
chr1: 154540105-154540255RP11-61L14.663.2
chr12: 12419400-12419550LRP666.47
View top connections.

Other

CodePlot