SOM cluster: 130

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 569
Promoter: 22%
CpG-Island: 40%
Conserved: 50%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 72/100 | e-val: 0
Factore-val(match)DB
SPI10.000000043069JASPAR
SPIB0.0000018038JASPAR
FEV0.000044846JASPAR
IRF10.000066972JASPAR
IRF20.00014441JASPAR
Sites: 68/100 | e-val: 7e-17
Factore-val(match)DB
Pax40.00000098231JASPAR
SP10.000001445JASPAR
Tal1::Gata10.000042795JASPAR
RREB10.0082592JASPAR
EWSR1-FLI10.0089708JASPAR
Sites: 28/100 | e-val: 0.0000047
Factore-val(match)DB
RREB10.000000025098JASPAR
Pax40.0000010029JASPAR
SP10.0000089202JASPAR
Klf40.00016142JASPAR
Tal1::Gata10.0035998JASPAR

BED file downloads

Download top of 569 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr1: 151299500-151299650PSMD432.05
chr10: 11220760-11220910RP3-323N1.243.31
chr10: 11220760-11220910CELF243.31
chr5: 114938120-114938270TMED7-TICAM243.79
chr5: 114938120-114938270TICAM243.79
chrX: 106917260-106917550TSC22D345.04
chr12: 29302380-29302530FAR245.16
chr17: 17752540-17752690SMCR545.46
chr19: 1020800-1020950SBNO246.67
chr19: 1020800-1020950KISS1R46.67
View top connections.

Other

CodePlot