SOM cluster: 1304

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 261
Promoter: 32%
CpG-Island: 73%
Conserved: 69%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 81/100 | e-val: 0
Factore-val(match)DB
SP10.0000040397JASPAR
PLAG10.0019302JASPAR
TFAP2A0.0026068JASPAR
Egr10.039123JASPAR
MIZF0.069012JASPAR
Sites: 100/100 | e-val: 2.9e-26
Factore-val(match)DB
SP10.000070282JASPAR
EWSR1-FLI10.00090313JASPAR
PLAG10.0032627JASPAR
TFAP2A0.031288JASPAR
SPIB0.080268JASPAR

BED file downloads

Download top of 261 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr10: 31891740-31891890ZEB128.77
chr8: 6407680-6407830RP11-115C21.437.42
chr9: 129884660-129884810ANGPTL243.91
chr19: 13129080-13129230NFIX51.28
chr2: 74230025-74230175DGUOK53.08
chr1: 156645340-156645490NES53.4
chr2: 30453380-30453530AC104698.253.48
chr2: 30453380-30453530AC104698.153.48
chr6: 3231200-3231350TUBB2B54.05
chr6: 3231200-3231350TUBB2BP154.05
View top connections.

Other

CodePlot