SOM cluster: 1307

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 181
Promoter: 32%
CpG-Island: 64%
Conserved: 58%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 94/100 | e-val: 0
Factore-val(match)DB
SP10.0000000000013779JASPAR
Egr10.0008291JASPAR
RREB10.0012743JASPAR
Klf40.0034996JASPAR
PLAG10.00944JASPAR
Sites: 83/100 | e-val: 1.8e-33
Factore-val(match)DB
SP10.0000014499JASPAR
Klf40.0089482JASPAR
RREB10.0098947JASPAR
Pax40.019299JASPAR
Egr10.036671JASPAR
Sites: 38/100 | e-val: 0.0000086
Factore-val(match)DB
SP10.00000000015043JASPAR
Klf40.00033583JASPAR
PPARG::RXRA0.0048534JASPAR
Pax40.0073599JASPAR
RREB10.0078475JASPAR

BED file downloads

Download top of 181 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr3: 53203120-53203270PRKCD41.61
chr3: 53203120-53203270RFT141.61
chr12: 111126820-111126970HVCN149.47
chr12: 111126820-111126970TCTN149.47
chr19: 51014040-51014190JOSD250.52
chr17: 73584360-73584510CASKIN253.27
chr19: 13227160-13227310NFIX57.39
chr19: 13227160-13227310TRMT157.39
chr19: 13227160-13227310IER257.39
chr2: 127413685-127413835GYPC58.4
View top connections.

Other

CodePlot