SOM cluster: 1308

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 340
Promoter: 1%
CpG-Island: 4%
Conserved: 25%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 47/100 | e-val: 0.000000028
Factore-val(match)DB
SP10.00000044127JASPAR
Pax40.0000011309JASPAR
RREB10.00057153JASPAR
MZF1_5-130.0014802JASPAR
EWSR1-FLI10.0023924JASPAR
Sites: 31/100 | e-val: 0.0097
Factore-val(match)DB
SP10.0015607JASPAR
PPARG::RXRA0.0023569JASPAR
CTCF0.0026495JASPAR
Tal1::Gata10.0065477JASPAR
EWSR1-FLI10.0069334JASPAR

BED file downloads

Download top of 340 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr1: 75596860-75597010RP11-510C10.231.54
chr17: 41930525-41930675PYY47.69
chr17: 41930525-41930675MPP247.69
chr20: 48501425-48501575SNAI159.69
chr8: 61968405-61968555AC022182.160.28
chr8: 61968405-61968555AC022182.360.28
chr19: 51255905-51256055SHANK163.17
chr19: 51255905-51256055KLK163.17
chr17: 77973685-77973835CCDC4064.04
chr1: 19042525-19042675PAX768.76
View top connections.

Other

CodePlot