SOM cluster: 1310

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 215
Promoter: 34%
CpG-Island: 17%
Conserved: 34%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 29/100 | e-val: 0.000071
Factore-val(match)DB
RREB10.0000000061756JASPAR
Pax40.000000061931JASPAR
SP10.00000020948JASPAR
Klf40.000030161JASPAR
Egr10.00622JASPAR

BED file downloads

Download top of 215 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr6: 33394205-33394355CUTA51.71
chr5: 172197280-172197430RP11-779O18.259.41
chr17: 17741905-17742055SREBF160.15
chr17: 17741905-17742055RAI160.15
chr3: 184052525-184052675CAMK2N265.57
chr3: 184052525-184052675PSMD265.57
chr3: 184052525-184052675FAM131A65.57
chr19: 39901380-39901530DLL368.19
chr19: 39901380-39901530ZFP3668.19
chr8: 116681720-116681870TRPS169.17
View top connections.

Other

CodePlot