SOM cluster: 1316

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 86
Promoter: 9%
CpG-Island: 13%
Conserved: 52%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 79/86 | e-val: 3.9e-31
Factore-val(match)DB
SP10.0000002956JASPAR
PLAG10.000012606JASPAR
Klf40.00090818JASPAR
Pax40.0024422JASPAR
INSM10.0042516JASPAR
Sites: 45/86 | e-val: 0.00036
Factore-val(match)DB
Hand1::Tcfe2a0.003299JASPAR
REST0.013518JASPAR
Tcfcp2l10.016026JASPAR
Zfx0.024658JASPAR
RREB10.034436JASPAR

BED file downloads

Download top of 86 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr5: 176040980-176041130RNF4454.69
chr5: 176040980-176041130EIF4E1B54.69
chr5: 176040980-176041130RN7SL684P54.69
chr5: 176040980-176041130TSPAN1754.69
chr22: 25764340-25764490RP3-462D8.257.5
chr7: 47611320-47611470TNS359.21
chr1: 23203440-23203590EPHB264.62
chrX: 73756320-73756470SLC16A271.05
chr3: 195619700-195619850RNU2-11P71.29
chr3: 195619700-195619850AC124944.571.29
View top connections.

Other

CodePlot