SOM cluster: 1319

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 156
Promoter: 4%
CpG-Island: 1%
Conserved: 29%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 59/100 | e-val: 2.1e-36
Factore-val(match)DB
AP10.00000000046363JASPAR
NFE2L20.000000037943JASPAR
PPARG0.0063466JASPAR
NR4A20.012374JASPAR
Pax20.012536JASPAR
Sites: 29/100 | e-val: 0.00066
Factore-val(match)DB
SP10.000051567JASPAR
Klf40.00086212JASPAR
RXR::RAR_DR50.0025726JASPAR
RREB10.0075913JASPAR
INSM10.0099034JASPAR

BED file downloads

Download top of 156 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr1: 145456080-145456230RP11-315I20.138.75
chr3: 129331960-129332110PLXND146.56
chr9: 130447000-130447150SH2D3C49.32
chr9: 130447000-130447150TOR2A49.32
chr17: 6458940-6459090TXNDC1753.53
chr17: 6458940-6459090PITPNM353.53
chr2: 55384780-55384930RPS27A54.97
chrX: 40121980-40122130BCOR58.96
chr22: 30432765-30432915MTMR362.56
chr3: 46737840-46737990ALS2CL65.86
View top connections.

Other

CodePlot