SOM cluster: 1322

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 154
Promoter: 34%
CpG-Island: 45%
Conserved: 74%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 97/100 | e-val: 0
Factore-val(match)DB
SP10.0000057353JASPAR
EWSR1-FLI10.0027794JASPAR
PLAG10.0028384JASPAR
Pax40.0034893JASPAR
MZF1_1-40.011572JASPAR
Sites: 47/100 | e-val: 0.000000000048
Factore-val(match)DB
TFAP2A0.00000029929JASPAR
SP10.000060435JASPAR
PLAG10.0013585JASPAR
NHLH10.012479JASPAR
TP530.018056JASPAR

BED file downloads

Download top of 154 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr12: 48576960-48577110C12orf6838.78
chr2: 200524060-200524210SEPHS1P649.58
chr1: 240255125-240255275RP11-567G24.358.11
chr1: 240255125-240255275FMN258.11
chr1: 240255125-240255275ADH5P358.11
chr1: 161168200-161168350FCER1G58.26
chr8: 16859000-16859150MICU364.18
chr16: 31021945-31022095STX1B68.25
chr11: 106888400-106888550GUCY1A269
chr5: 141705820-141705970SPRY469.4
View top connections.

Other

CodePlot