SOM cluster: 1323

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 341
Promoter: 33%
CpG-Island: 95%
Conserved: 65%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 94/100 | e-val: 0
Factore-val(match)DB
SP10.0000014947JASPAR
TFAP2A0.0010888JASPAR
Klf40.00319JASPAR
PLAG10.0083985JASPAR
Egr10.015697JASPAR
Sites: 89/100 | e-val: 0
Factore-val(match)DB
SP10.000094373JASPAR
PLAG10.0029925JASPAR
Klf40.0044807JASPAR
TFAP2A0.007061JASPAR
RREB10.043781JASPAR
Sites: 72/100 | e-val: 8.1e-17
Factore-val(match)DB
TFAP2A0.000035649JASPAR
SP10.00004236JASPAR
PLAG10.0031677JASPAR
EBF10.01234JASPAR
MZF1_1-40.015918JASPAR

BED file downloads

Download top of 341 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr3: 127391385-127391535MCM241.47
chr3: 127391385-127391535TPRA141.47
chr16: 3070440-3070590PKMYT148.07
chr9: 139440225-139440375SEC16A51.66
chr9: 139440225-139440375RP11-611D20.251.66
chr11: 64782040-64782190CDCA553.07
chr3: 184080100-184080250RP11-433C9.254.22
chr1: 161129445-161129595PVRL457.91
chr1: 161129445-161129595NR1I357.91
chr1: 161129445-161129595PCP4L157.91
View top connections.

Other

CodePlot