SOM cluster: 1354

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 173
Promoter: 2%
CpG-Island: 0%
Conserved: 42%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 29/100 | e-val: 0.003
Factore-val(match)DB
TLX1::NFIC0.0000000000076656JASPAR
NFIC0.0081771JASPAR
PPARG::RXRA0.011844JASPAR
ESR20.018071JASPAR
Hand1::Tcfe2a0.018692JASPAR
Sites: 11/100 | e-val: 0.32
Factore-val(match)DB
Klf40.000000026708JASPAR
SP10.00000040086JASPAR
RREB10.000053391JASPAR
PLAG10.00090005JASPAR
Pax40.0021808JASPAR

BED file downloads

Download top of 173 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr19: 2221320-2221470SF3A256.33
chr19: 2221320-2221470AMH56.33
chr5: 166722500-166722650CTC-286N12.162.24
chr15: 43894620-43894770PPIP5K162.51
chr2: 47259560-47259710CALM265.14
chr4: 152462825-152462975FAM160A165.37
chr5: 175316960-175317110CPLX267.51
chr5: 31936100-31936250PDZD271.93
chr13: 102848385-102848535FGF14-IT176.06
chr13: 102848385-102848535RPL39P2976.06
View top connections.

Other

CodePlot