SOM cluster: 1372

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 294
Promoter: 35%
CpG-Island: 68%
Conserved: 54%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 88/100 | e-val: 7.9e-36
Factore-val(match)DB
SP10.00001697JASPAR
TFAP2A0.000043081JASPAR
PLAG10.00023993JASPAR
TP530.013705JASPAR
Klf40.018063JASPAR
Sites: 43/100 | e-val: 0.000000012
Factore-val(match)DB
SP10.000000062873JASPAR
Klf40.000046809JASPAR
INSM10.000050784JASPAR
Pax40.0026783JASPAR
PLAG10.0032035JASPAR

BED file downloads

Download top of 294 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr1: 999085-999235AGRN31.4
chrX: 47092360-47092510INE143.32
chrX: 47092360-47092510CTD-2522E6.443.32
chrX: 47092360-47092510RP11-571E6.143.32
chrX: 47092360-47092510CDK1643.32
chr22: 50969620-50969770CHKB46.68
chr17: 18161340-18161490LLGL148
chr17: 18161340-18161490SMCR848
chr17: 18161340-18161490TOP3A48
chrX: 48555565-48555715SUV39H148.33
View top connections.

Other

CodePlot