SOM cluster: 1374

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 197
Promoter: 21%
CpG-Island: 95%
Conserved: 75%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 99/100 | e-val: 0
Factore-val(match)DB
TFAP2A0.00013579JASPAR
SP10.0086056JASPAR
Zfx0.010387JASPAR
Egr10.027924JASPAR
E2F10.037918JASPAR
Sites: 95/100 | e-val: 0
Factore-val(match)DB
NHLH10.0028028JASPAR
TFAP2A0.0030556JASPAR
SP10.008032JASPAR
Myf0.01609JASPAR
PLAG10.019922JASPAR
Sites: 94/100 | e-val: 3.8e-17
Factore-val(match)DB
SP10.000269JASPAR
TFAP2A0.0062719JASPAR
Zfx0.049927JASPAR
CTCF0.10452JASPAR
EWSR1-FLI10.10897JASPAR

BED file downloads

Download top of 197 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr11: 18433760-18433910LDHAL6A63.95
chr9: 100850005-100850155ANP32B66.1
chr4: 1107305-1107455RP11-20I20.266.79
chr4: 1107305-1107455RNF21266.79
chr4: 1107305-1107455SNORA4866.79
chr1: 17019380-17019530NBPF171.61
chr21: 46238465-46238615ITGB274.38
chr18: 43417680-43417830SLC14A176.8
chr19: 50193125-50193275AP2A176.82
chr18: 32847480-32847630ZSCAN3082.69
View top connections.

Other

CodePlot