SOM cluster: 138

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 26
Promoter: 19%
CpG-Island: 0%
Conserved: 23%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 23/26 | e-val: 0.00000051
Factore-val(match)DB
Foxd30.00000031862JASPAR
FOXI10.00024562JASPAR
Foxq10.00063127JASPAR
Foxa20.0012599JASPAR
FOXA10.0045553JASPAR
Sites: 9/26 | e-val: 0.001
Factore-val(match)DB
NKX3-10.007142JASPAR
HOXA50.033354JASPAR
HNF1A0.040317JASPAR
MEF2A0.049519JASPAR
RXRA::VDR0.06703JASPAR
Sites: 14/26 | e-val: 0.043
Factore-val(match)DB
CEBPA0.0004253JASPAR
Pax40.0013023JASPAR
RREB10.0070391JASPAR
Nkx2-50.0091654JASPAR
Tcfcp2l10.012455JASPAR

BED file downloads

Download top of 26 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr11: 10530820-10530970MRVI1-AS176.4
chr5: 99383680-99383830EEF1A1P2077.16
chr8: 68497605-68497755CPA6120.59
chr21: 46796060-46796210LINC00316133.28
chr5: 79946680-79946830ANKRD34B177.32
chrX: 55207820-55207970PAGE5217.78
chr5: 134260940-134261090PCBD2224.26
chrX: 110660220-110660370DCX382.43
View top connections.

Other

CodePlot