SOM cluster: 138
Cluster Hypersensitivity Profile
Genomic Location Trend
These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.Stats
Number of sites: 26Promoter: 19%
CpG-Island: 0%
Conserved: 23%
Enriched Motifs & Matches
Match Detail: [Jaspar]Sites: 23/26 | e-val: 0.00000051 | ||
---|---|---|
Factor | e-val(match) | DB |
Foxd3 | 0.00000031862 | JASPAR |
FOXI1 | 0.00024562 | JASPAR |
Foxq1 | 0.00063127 | JASPAR |
Foxa2 | 0.0012599 | JASPAR |
FOXA1 | 0.0045553 | JASPAR |
Sites: 9/26 | e-val: 0.001 | ||
Factor | e-val(match) | DB |
NKX3-1 | 0.007142 | JASPAR |
HOXA5 | 0.033354 | JASPAR |
HNF1A | 0.040317 | JASPAR |
MEF2A | 0.049519 | JASPAR |
RXRA::VDR | 0.06703 | JASPAR |
Sites: 14/26 | e-val: 0.043 | ||
Factor | e-val(match) | DB |
CEBPA | 0.0004253 | JASPAR |
Pax4 | 0.0013023 | JASPAR |
RREB1 | 0.0070391 | JASPAR |
Nkx2-5 | 0.0091654 | JASPAR |
Tcfcp2l1 | 0.012455 | JASPAR |
BED file downloads
Top 10 Example Regions
Location | Gene Link | Dist. |
---|---|---|
chr11: 10530820-10530970 | MRVI1-AS1 | 76.4 |
chr5: 99383680-99383830 | EEF1A1P20 | 77.16 |
chr8: 68497605-68497755 | CPA6 | 120.59 |
chr21: 46796060-46796210 | LINC00316 | 133.28 |
chr5: 79946680-79946830 | ANKRD34B | 177.32 |
chrX: 55207820-55207970 | PAGE5 | 217.78 |
chr5: 134260940-134261090 | PCBD2 | 224.26 |
chrX: 110660220-110660370 | DCX | 382.43 |