SOM cluster: 1385

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 173
Promoter: 1%
CpG-Island: 0%
Conserved: 54%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 23/100 | e-val: 0.000000000051
Factore-val(match)DB
Foxd30.0013357JASPAR
Pax40.0087476JASPAR
NFATC20.0093547JASPAR
FOXI10.012565JASPAR
Foxq10.015055JASPAR
Sites: 52/100 | e-val: 0.3
Factore-val(match)DB
RUNX10.0000000019632JASPAR
ZNF354C0.0012306JASPAR
RREB10.0038456JASPAR
MYC::MAX0.014732JASPAR
FOXO30.017272JASPAR

BED file downloads

Download top of 173 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr9: 107592505-107592655NIPSNAP3A31.34
chr6: 118863880-118864030RP11-57K17.135.52
chr7: 107575580-107575730LAMB438.65
chr7: 107575580-107575730LAMB138.65
chr17: 15944340-15944490TTC1945.31
chr20: 57603100-57603250SLMO249.44
chr20: 57603100-57603250NELFCD49.44
chr20: 57603100-57603250ATP5E49.44
chr20: 57603100-57603250CTSZ49.44
chr20: 57603100-57603250TUBB149.44
View top connections.

Other

CodePlot